Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne3Q8BT60 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne3Q8BT60 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Ank2-226ENSMUST00000189368 339 ntBASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cpne3Q8BT60 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Efs-202ENSMUST00000227037 2540 ntBASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpne3Q8BT60 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms