Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Mir7023-201ENSMUST00000185093 64 ntBASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gm6415-201ENSMUST00000118488 348 ntBASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gm20949-201ENSMUST00000206478 952 ntBASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gm18049-201ENSMUST00000208909 581 ntBASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scfd1Q8BRF7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Gm13015-201ENSMUST00000118674 204 ntBASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Gm14057-201ENSMUST00000120631 482 ntBASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scfd1Q8BRF7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Gm27622-201ENSMUST00000183779 60 ntBASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms