Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Ckap4Q8BMK4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.27□□□□□ -0.13
Ckap4Q8BMK4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm9103-201ENSMUST00000119371 405 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ckap4Q8BMK4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms