Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Gm8602-201ENSMUST00000184045 607 ntBASIC21.11■□□□□ 0.97
Usp54Q8BL06 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Gm45667-201ENSMUST00000210380 1316 ntBASIC21.11■□□□□ 0.97
Usp54Q8BL06 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp54Q8BL06 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC21.1■□□□□ 0.97
Usp54Q8BL06 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 AC238811.3-201ENSMUST00000225422 709 ntBASIC21.1■□□□□ 0.97
Usp54Q8BL06 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Usp54Q8BL06 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC21.09■□□□□ 0.97
Usp54Q8BL06 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Gm37748-201ENSMUST00000194379 1140 ntBASIC21.09■□□□□ 0.97
Usp54Q8BL06 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC21.09■□□□□ 0.97
Usp54Q8BL06 CT030657.3-201ENSMUST00000222707 1200 ntBASIC21.09■□□□□ 0.97
Usp54Q8BL06 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp54Q8BL06 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.08■□□□□ 0.97
Usp54Q8BL06 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp54Q8BL06 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Usp54Q8BL06 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Usp54Q8BL06 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp54Q8BL06 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp54Q8BL06 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Usp54Q8BL06 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Gm10275-202ENSMUST00000168697 495 ntBASIC21.07■□□□□ 0.96
Usp54Q8BL06 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC21.07■□□□□ 0.96
Usp54Q8BL06 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Gm10275-201ENSMUST00000092620 635 ntBASIC21.07■□□□□ 0.96
Usp54Q8BL06 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Gm27528-202ENSMUST00000222916 2012 ntBASIC21.07■□□□□ 0.96
Usp54Q8BL06 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp54Q8BL06 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Gm11918-201ENSMUST00000121660 179 ntBASIC21.06■□□□□ 0.96
Usp54Q8BL06 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms