Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Gm8097-201ENSMUST00000117903 829 ntBASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Mir7071-201ENSMUST00000184847 69 ntBASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdhr3Q8BL00 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdhr3Q8BL00 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdhr3Q8BL00 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Carlr-201ENSMUST00000181515 2574 ntBASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdhr3Q8BL00 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms