Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm12134-201ENSMUST00000122109 520 ntBASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm8655-201ENSMUST00000221159 852 ntBASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Gm15358-201ENSMUST00000119249 520 ntBASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf38Q8BI21 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gm8097-201ENSMUST00000117903 829 ntBASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf38Q8BI21 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf38Q8BI21 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms