Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Gm17968-201ENSMUST00000194902 784 ntBASIC15.54■□□□□ 0.08
Trim62Q80V85 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.54■□□□□ 0.08
Trim62Q80V85 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim62Q80V85 BC037039-201ENSMUST00000192003 2205 ntBASIC15.53■□□□□ 0.08
Trim62Q80V85 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.53■□□□□ 0.08
Trim62Q80V85 Gm16026-204ENSMUST00000162652 683 ntBASIC15.53■□□□□ 0.08
Trim62Q80V85 Gm2756-201ENSMUST00000195851 400 ntBASIC15.53■□□□□ 0.08
Trim62Q80V85 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim62Q80V85 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.53■□□□□ 0.08
Trim62Q80V85 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim62Q80V85 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Trim62Q80V85 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim62Q80V85 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim62Q80V85 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trim62Q80V85 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim62Q80V85 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim62Q80V85 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim62Q80V85 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim62Q80V85 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim62Q80V85 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms