Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Gm13365-201ENSMUST00000121188 973 ntBASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh19Q80TF3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Gm44335-201ENSMUST00000196879 141 ntBASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Gm44297-201ENSMUST00000198304 141 ntBASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Gm44346-201ENSMUST00000198851 141 ntBASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh19Q80TF3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms