Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Mir6404-201ENSMUST00000183699 94 ntBASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf38bQ80SY5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm22065-201ENSMUST00000103753 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm22066-201ENSMUST00000103761 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24932-201ENSMUST00000103763 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24115-201ENSMUST00000103799 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm22190-201ENSMUST00000103827 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm22191-201ENSMUST00000103831 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24721-201ENSMUST00000103849 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm28018-201ENSMUST00000103869 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm26399-201ENSMUST00000103937 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm25349-201ENSMUST00000177728 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm23616-201ENSMUST00000177797 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm25871-201ENSMUST00000177816 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24752-201ENSMUST00000178240 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24496-201ENSMUST00000178287 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm25649-201ENSMUST00000178476 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm25548-201ENSMUST00000178681 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm23147-201ENSMUST00000178841 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm26095-201ENSMUST00000179270 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm22171-201ENSMUST00000179283 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm23936-201ENSMUST00000179354 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm22619-201ENSMUST00000179516 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm25255-201ENSMUST00000179579 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24755-201ENSMUST00000179691 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm26506-201ENSMUST00000179692 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm25086-201ENSMUST00000179931 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm23243-201ENSMUST00000180047 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24659-201ENSMUST00000180212 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm24169-201ENSMUST00000180244 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm23689-201ENSMUST00000180354 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm27359-201ENSMUST00000184153 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm27785-201ENSMUST00000184268 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm27466-201ENSMUST00000184396 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm27703-201ENSMUST00000184836 110 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Gm7774-201ENSMUST00000200064 533 ntBASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf38bQ80SY5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38bQ80SY5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38bQ80SY5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Prpf38bQ80SY5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms