Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx4Q7TNK1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx4Q7TNK1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.46□□□□□ -0.1
Rfx4Q7TNK1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx4Q7TNK1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx4Q7TNK1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx4Q7TNK1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Mir770-201ENSMUST00000103252 94 ntBASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Gm43799-201ENSMUST00000201845 579 ntBASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Gm18101-201ENSMUST00000215769 548 ntBASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx4Q7TNK1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Gm22697-201ENSMUST00000175194 63 ntBASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx4Q7TNK1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms