Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.89■□□□□ 0.45
Sned1Q70E20 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sned1Q70E20 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.89■□□□□ 0.45
Sned1Q70E20 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.89■□□□□ 0.45
Sned1Q70E20 Gm18827-201ENSMUST00000188341 790 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 Gm9182-201ENSMUST00000217829 639 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.89■□□□□ 0.45
Sned1Q70E20 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Sned1Q70E20 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Sned1Q70E20 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sned1Q70E20 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Sned1Q70E20 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.88■□□□□ 0.45
Sned1Q70E20 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.88■□□□□ 0.45
Sned1Q70E20 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.88■□□□□ 0.45
Sned1Q70E20 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.88■□□□□ 0.45
Sned1Q70E20 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sned1Q70E20 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.87■□□□□ 0.45
Sned1Q70E20 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.87■□□□□ 0.45
Sned1Q70E20 Gm23931-201ENSMUST00000103842 109 ntBASIC17.87■□□□□ 0.45
Sned1Q70E20 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sned1Q70E20 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.87■□□□□ 0.45
Sned1Q70E20 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.87■□□□□ 0.45
Sned1Q70E20 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.87■□□□□ 0.45
Sned1Q70E20 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sned1Q70E20 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sned1Q70E20 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.87■□□□□ 0.45
Sned1Q70E20 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sned1Q70E20 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.86■□□□□ 0.45
Sned1Q70E20 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sned1Q70E20 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Olfr582-201ENSMUST00000098212 960 ntBASIC17.86■□□□□ 0.45
Sned1Q70E20 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sned1Q70E20 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.85■□□□□ 0.45
Sned1Q70E20 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sned1Q70E20 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Sned1Q70E20 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.85■□□□□ 0.45
Sned1Q70E20 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.85■□□□□ 0.45
Sned1Q70E20 Gm7561-201ENSMUST00000211203 886 ntBASIC17.85■□□□□ 0.45
Sned1Q70E20 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sned1Q70E20 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.85■□□□□ 0.45
Sned1Q70E20 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms