Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Gm18737-201ENSMUST00000173594 937 ntBASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Gm7774-201ENSMUST00000200064 533 ntBASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.97■□□□□ 0.47
Npc1l1Q6T3U4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.96■□□□□ 0.47
Npc1l1Q6T3U4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm22065-201ENSMUST00000103753 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm22066-201ENSMUST00000103761 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24932-201ENSMUST00000103763 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24115-201ENSMUST00000103799 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm22190-201ENSMUST00000103827 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm22191-201ENSMUST00000103831 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24721-201ENSMUST00000103849 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm28018-201ENSMUST00000103869 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm26399-201ENSMUST00000103937 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm25349-201ENSMUST00000177728 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm23616-201ENSMUST00000177797 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm25871-201ENSMUST00000177816 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24752-201ENSMUST00000178240 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24496-201ENSMUST00000178287 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm25649-201ENSMUST00000178476 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm25548-201ENSMUST00000178681 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm23147-201ENSMUST00000178841 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm26095-201ENSMUST00000179270 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm22171-201ENSMUST00000179283 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm23936-201ENSMUST00000179354 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm22619-201ENSMUST00000179516 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm25255-201ENSMUST00000179579 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24755-201ENSMUST00000179691 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm26506-201ENSMUST00000179692 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm25086-201ENSMUST00000179931 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm23243-201ENSMUST00000180047 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24659-201ENSMUST00000180212 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm24169-201ENSMUST00000180244 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm23689-201ENSMUST00000180354 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm27359-201ENSMUST00000184153 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm27785-201ENSMUST00000184268 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm27466-201ENSMUST00000184396 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Gm27703-201ENSMUST00000184836 110 ntBASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Npc1l1Q6T3U4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms