Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scaf4Q6PFF0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm15165-201ENSMUST00000118140 502 ntBASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm10231-201ENSMUST00000181584 441 ntBASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gm10175-202ENSMUST00000208752 441 ntBASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Scaf4Q6PFF0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf4Q6PFF0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf4Q6PFF0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms