Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Gm42612-201ENSMUST00000197986 623 ntBASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Gm43170-201ENSMUST00000199827 612 ntBASIC17.52■□□□□ 0.4
Nup98Q6PFD9 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup98Q6PFD9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm8749-201ENSMUST00000117737 331 ntBASIC17.51■□□□□ 0.39
Nup98Q6PFD9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm45453-201ENSMUST00000211758 853 ntBASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm7653-201ENSMUST00000214567 508 ntBASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Gm9229-201ENSMUST00000222777 126 ntBASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup98Q6PFD9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Gm15321-201ENSMUST00000121290 288 ntBASIC17.5■□□□□ 0.39
Nup98Q6PFD9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup98Q6PFD9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Gm9182-201ENSMUST00000217829 639 ntBASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Gm6218-201ENSMUST00000219812 628 ntBASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Gm21854-201ENSMUST00000179901 471 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms