Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gm29667-201ENSMUST00000190817 490 ntBASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snrnp40Q6PE01 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Asic1-205ENSMUST00000228185 1818 ntBASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snrnp40Q6PE01 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Mir1897-201ENSMUST00000122581 272 ntBASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms