Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Mir5130-201ENSMUST00000175160 84 ntBASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gm45058-201ENSMUST00000205810 766 ntBASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf220Q6PDX6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf220Q6PDX6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.27□□□□□ -0.12
Rnf220Q6PDX6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms