Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
Smarcd3Q6P9Z1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Smarcd3Q6P9Z1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcd3Q6P9Z1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcd3Q6P9Z1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcd3Q6P9Z1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Gm15372-201ENSMUST00000120729 834 ntBASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Gm7506-201ENSMUST00000207758 815 ntBASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Smarcd3Q6P9Z1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Gm8655-201ENSMUST00000221159 852 ntBASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcd3Q6P9Z1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcd3Q6P9Z1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms