Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf8Q6DID3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf8Q6DID3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Scaf8Q6DID3 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.49■□□□□ 0.39
Scaf8Q6DID3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Scaf8Q6DID3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scaf8Q6DID3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Gm13216-201ENSMUST00000117145 591 ntBASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Gm11918-201ENSMUST00000121660 179 ntBASIC17.48■□□□□ 0.39
Scaf8Q6DID3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Gm10766-202ENSMUST00000194123 606 ntBASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Gm37102-201ENSMUST00000195740 1105 ntBASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scaf8Q6DID3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scaf8Q6DID3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Gm17150-201ENSMUST00000165577 381 ntBASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.46■□□□□ 0.39
Scaf8Q6DID3 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scaf8Q6DID3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scaf8Q6DID3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scaf8Q6DID3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Scaf8Q6DID3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.45■□□□□ 0.38
Scaf8Q6DID3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf8Q6DID3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms