Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.94□□□□□ -0.18
VcanQ62059 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.94□□□□□ -0.18
VcanQ62059 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.94□□□□□ -0.18
VcanQ62059 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.93□□□□□ -0.18
VcanQ62059 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.93□□□□□ -0.18
VcanQ62059 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VcanQ62059 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.93□□□□□ -0.18
VcanQ62059 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.93□□□□□ -0.18
VcanQ62059 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VcanQ62059 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VcanQ62059 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VcanQ62059 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.93□□□□□ -0.18
VcanQ62059 Gm6257-201ENSMUST00000163864 910 ntBASIC13.93□□□□□ -0.18
VcanQ62059 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.93□□□□□ -0.18
VcanQ62059 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
VcanQ62059 Gm27243-201ENSMUST00000183964 521 ntBASIC13.93□□□□□ -0.18
VcanQ62059 AA619741-201ENSMUST00000195095 646 ntBASIC13.93□□□□□ -0.18
VcanQ62059 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VcanQ62059 Gm24526-201ENSMUST00000082921 158 ntBASIC13.93□□□□□ -0.18
VcanQ62059 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.93□□□□□ -0.18
VcanQ62059 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VcanQ62059 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.92□□□□□ -0.18
VcanQ62059 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.92□□□□□ -0.18
VcanQ62059 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.92□□□□□ -0.18
VcanQ62059 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.92□□□□□ -0.18
VcanQ62059 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.92□□□□□ -0.18
VcanQ62059 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.92□□□□□ -0.18
VcanQ62059 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.92□□□□□ -0.18
VcanQ62059 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.92□□□□□ -0.18
VcanQ62059 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VcanQ62059 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VcanQ62059 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VcanQ62059 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
VcanQ62059 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VcanQ62059 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VcanQ62059 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.91□□□□□ -0.18
VcanQ62059 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VcanQ62059 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VcanQ62059 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Gm5356-201ENSMUST00000093326 615 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms