Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.11□□□□□ -0.63
Foxc1Q61572 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Gm12350-201ENSMUST00000121208 462 ntBASIC11.11□□□□□ -0.63
Foxc1Q61572 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.11□□□□□ -0.63
Foxc1Q61572 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Gm10478-201ENSMUST00000084451 396 ntBASIC11.11□□□□□ -0.63
Foxc1Q61572 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Foxc1Q61572 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.11□□□□□ -0.63
Foxc1Q61572 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Foxc1Q61572 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Gm38188-201ENSMUST00000192879 856 ntBASIC11.1□□□□□ -0.63
Foxc1Q61572 Gm38216-201ENSMUST00000194872 1214 ntBASIC11.1□□□□□ -0.63
Foxc1Q61572 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Foxc1Q61572 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Foxc1Q61572 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.09□□□□□ -0.63
Foxc1Q61572 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Gm15358-201ENSMUST00000119249 520 ntBASIC11.09□□□□□ -0.63
Foxc1Q61572 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.09□□□□□ -0.63
Foxc1Q61572 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms