Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.14□□□□□ -0.15
Sox17Q61473 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.14□□□□□ -0.15
Sox17Q61473 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox17Q61473 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Sox17Q61473 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox17Q61473 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox17Q61473 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Gm14722-201ENSMUST00000118943 689 ntBASIC14.13□□□□□ -0.15
Sox17Q61473 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox17Q61473 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox17Q61473 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.13□□□□□ -0.15
Sox17Q61473 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox17Q61473 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.13□□□□□ -0.15
Sox17Q61473 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox17Q61473 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox17Q61473 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox17Q61473 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox17Q61473 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Sox17Q61473 Gm6345-202ENSMUST00000180900 204 ntBASIC14.12□□□□□ -0.15
Sox17Q61473 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Sox17Q61473 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Sox17Q61473 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox17Q61473 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sox17Q61473 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Sox17Q61473 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox17Q61473 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox17Q61473 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox17Q61473 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox17Q61473 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Gm15565-201ENSMUST00000118890 427 ntBASIC14.11□□□□□ -0.15
Sox17Q61473 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.11□□□□□ -0.15
Sox17Q61473 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox17Q61473 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox17Q61473 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox17Q61473 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Gm18032-201ENSMUST00000222541 538 ntBASIC14.11□□□□□ -0.15
Sox17Q61473 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Sox17Q61473 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox17Q61473 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox17Q61473 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox17Q61473 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms