Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.59■□□□□ 0.25
Col11a1Q61245 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col11a1Q61245 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.59■□□□□ 0.25
Col11a1Q61245 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.59■□□□□ 0.25
Col11a1Q61245 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col11a1Q61245 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col11a1Q61245 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.59■□□□□ 0.25
Col11a1Q61245 Gm6244-201ENSMUST00000178732 841 ntBASIC16.59■□□□□ 0.25
Col11a1Q61245 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.59■□□□□ 0.25
Col11a1Q61245 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col11a1Q61245 Gm10478-201ENSMUST00000084451 396 ntBASIC16.59■□□□□ 0.25
Col11a1Q61245 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a1Q61245 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col11a1Q61245 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col11a1Q61245 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col11a1Q61245 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col11a1Q61245 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col11a1Q61245 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col11a1Q61245 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.57■□□□□ 0.24
Col11a1Q61245 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.57■□□□□ 0.24
Col11a1Q61245 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col11a1Q61245 Gm14660-201ENSMUST00000119809 575 ntBASIC16.56■□□□□ 0.24
Col11a1Q61245 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.56■□□□□ 0.24
Col11a1Q61245 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col11a1Q61245 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Col11a1Q61245 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.56■□□□□ 0.24
Col11a1Q61245 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Gm15460-201ENSMUST00000118147 391 ntBASIC16.56■□□□□ 0.24
Col11a1Q61245 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.56■□□□□ 0.24
Col11a1Q61245 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.56■□□□□ 0.24
Col11a1Q61245 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col11a1Q61245 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col11a1Q61245 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Gm37424-201ENSMUST00000191727 561 ntBASIC16.55■□□□□ 0.24
Col11a1Q61245 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a1Q61245 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.55■□□□□ 0.24
Col11a1Q61245 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm9257-201ENSMUST00000221254 232 ntBASIC16.54■□□□□ 0.24
Col11a1Q61245 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms