Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.9□□□□□ -0.34
Clns1aQ61189 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clns1aQ61189 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clns1aQ61189 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clns1aQ61189 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clns1aQ61189 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clns1aQ61189 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clns1aQ61189 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clns1aQ61189 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Clns1aQ61189 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Clns1aQ61189 Mir5130-201ENSMUST00000175160 84 ntBASIC12.89□□□□□ -0.35
Clns1aQ61189 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Clns1aQ61189 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.89□□□□□ -0.35
Clns1aQ61189 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clns1aQ61189 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clns1aQ61189 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.88□□□□□ -0.35
Clns1aQ61189 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Gm27389-201ENSMUST00000183622 195 ntBASIC12.88□□□□□ -0.35
Clns1aQ61189 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.88□□□□□ -0.35
Clns1aQ61189 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.88□□□□□ -0.35
Clns1aQ61189 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Clns1aQ61189 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clns1aQ61189 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clns1aQ61189 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clns1aQ61189 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.87□□□□□ -0.35
Clns1aQ61189 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Clns1aQ61189 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.87□□□□□ -0.35
Clns1aQ61189 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.87□□□□□ -0.35
Clns1aQ61189 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.87□□□□□ -0.35
Clns1aQ61189 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clns1aQ61189 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clns1aQ61189 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.86□□□□□ -0.35
Clns1aQ61189 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clns1aQ61189 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.86□□□□□ -0.35
Clns1aQ61189 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms