Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Gm44771-201ENSMUST00000206975 626 ntBASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Atp13a4Q5XF90 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 AW822252-206ENSMUST00000208904 237 ntBASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atp13a4Q5XF90 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atp13a4Q5XF90 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms