Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Gm27631-201ENSMUST00000184163 466 ntBASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Gm6222-201ENSMUST00000120787 396 ntBASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Gm15321-201ENSMUST00000121290 288 ntBASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 AA619741-201ENSMUST00000195095 646 ntBASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Gm45453-201ENSMUST00000211758 853 ntBASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf1Q5U4C3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scaf1Q5U4C3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Gm37230-201ENSMUST00000194491 818 ntBASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scaf1Q5U4C3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Gm13323-201ENSMUST00000120245 1151 ntBASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Dupd1-202ENSMUST00000224735 548 ntBASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf1Q5U4C3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms