Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16■□□□□ 0.15
Shroom1Q5SX79 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Shroom1Q5SX79 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16■□□□□ 0.15
Shroom1Q5SX79 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Sybu-209ENSMUST00000228639 4113 ntBASIC16■□□□□ 0.15
Shroom1Q5SX79 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shroom1Q5SX79 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Grk6-207ENSMUST00000225925 2769 ntBASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.99■□□□□ 0.15
Shroom1Q5SX79 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Gm10499-201ENSMUST00000174094 934 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Gm7063-201ENSMUST00000186840 981 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Gm43474-201ENSMUST00000196415 774 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms