Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Gm11025-201ENSMUST00000140773 466 ntBASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Gm45612-201ENSMUST00000211320 160 ntBASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vps54Q5SPW0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Gm11745-201ENSMUST00000121669 448 ntBASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vps54Q5SPW0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Gm16026-204ENSMUST00000162652 683 ntBASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Chchd1-203ENSMUST00000224633 557 ntBASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vps54Q5SPW0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vps54Q5SPW0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps54Q5SPW0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms