Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Gm3365-201ENSMUST00000216296 1480 ntBASIC25.98■■□□□ 1.75
Trim41Q5NCC3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim41Q5NCC3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 App-207ENSMUST00000227737 2827 ntBASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim41Q5NCC3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim41Q5NCC3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
Trim41Q5NCC3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Gm11425-201ENSMUST00000119608 498 ntBASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Gm8515-201ENSMUST00000194852 576 ntBASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Gm9396-201ENSMUST00000076703 567 ntBASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim41Q5NCC3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm13517-201ENSMUST00000120782 1495 ntBASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm29541-201ENSMUST00000191351 678 ntBASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC25.94■■□□□ 1.74
Trim41Q5NCC3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Gm8131-201ENSMUST00000213783 1570 ntBASIC25.94■■□□□ 1.74
Trim41Q5NCC3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Gm13015-201ENSMUST00000118674 204 ntBASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Gm8116-201ENSMUST00000182917 1201 ntBASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC25.93■■□□□ 1.74
Trim41Q5NCC3 AC166349.1-201ENSMUST00000220866 695 ntBASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 AC132863.2-201ENSMUST00000226643 799 ntBASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC25.93■■□□□ 1.74
Trim41Q5NCC3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim41Q5NCC3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim41Q5NCC3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms