Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gm6659-201ENSMUST00000174752 547 ntBASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.72■□□□□ 0.11
Vps41Q5KU39 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gm18622-201ENSMUST00000219361 595 ntBASIC15.72■□□□□ 0.11
Vps41Q5KU39 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.72■□□□□ 0.11
Vps41Q5KU39 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps41Q5KU39 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps41Q5KU39 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps41Q5KU39 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vps41Q5KU39 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps41Q5KU39 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.7■□□□□ 0.1
Vps41Q5KU39 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Gm15165-201ENSMUST00000118140 502 ntBASIC15.7■□□□□ 0.1
Vps41Q5KU39 Gm7506-201ENSMUST00000207758 815 ntBASIC15.7■□□□□ 0.1
Vps41Q5KU39 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps41Q5KU39 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.69■□□□□ 0.1
Vps41Q5KU39 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Gm4459-201ENSMUST00000118750 468 ntBASIC15.69■□□□□ 0.1
Vps41Q5KU39 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.69■□□□□ 0.1
Vps41Q5KU39 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.69■□□□□ 0.1
Vps41Q5KU39 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps41Q5KU39 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps41Q5KU39 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms