Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shank3Q4ACU6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm4984-201ENSMUST00000115987 360 ntBASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.42■□□□□ 0.54
Shank3Q4ACU6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm33320-201ENSMUST00000192232 530 ntBASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm5356-201ENSMUST00000093326 615 ntBASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.42■□□□□ 0.54
Shank3Q4ACU6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gm15824-201ENSMUST00000119516 955 ntBASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gm10275-202ENSMUST00000168697 495 ntBASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gm10275-201ENSMUST00000092620 635 ntBASIC18.41■□□□□ 0.54
Shank3Q4ACU6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shank3Q4ACU6 Gm12390-201ENSMUST00000117897 397 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm5354-201ENSMUST00000182417 973 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Mir3547-201ENSMUST00000175461 88 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm9002-201ENSMUST00000178437 499 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm18827-201ENSMUST00000188341 790 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm2495-201ENSMUST00000191160 466 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms