Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim80Q3V061 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim80Q3V061 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim80Q3V061 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim80Q3V061 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim80Q3V061 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim80Q3V061 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim80Q3V061 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim80Q3V061 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim80Q3V061 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim80Q3V061 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Trim80Q3V061 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim80Q3V061 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.56■□□□□ 0.08
Trim80Q3V061 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim80Q3V061 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim80Q3V061 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms