Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Gm10033-202ENSMUST00000211874 928 ntBASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1brtQ3UNC9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.85□□□□□ -0.67
Cks1brtQ3UNC9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Gm13158-201ENSMUST00000122007 736 ntBASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Il3ra-202ENSMUST00000223589 738 ntBASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms