Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc4Q3TCX3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc4Q3TCX3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc4Q3TCX3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Gm18489-201ENSMUST00000172565 551 ntBASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Khdc4Q3TCX3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Gm14701-201ENSMUST00000117156 348 ntBASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Khdc4Q3TCX3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Khdc4Q3TCX3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Khdc4Q3TCX3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Khdc4Q3TCX3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms