Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.43□□□□□ -0.42
Trim63Q38HM4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.43□□□□□ -0.42
Trim63Q38HM4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Gm27000-201ENSMUST00000182943 842 ntBASIC12.43□□□□□ -0.42
Trim63Q38HM4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.42□□□□□ -0.42
Trim63Q38HM4 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.42□□□□□ -0.42
Trim63Q38HM4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim63Q38HM4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.41□□□□□ -0.42
Trim63Q38HM4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.41□□□□□ -0.42
Trim63Q38HM4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim63Q38HM4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim63Q38HM4 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.4□□□□□ -0.42
Trim63Q38HM4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms