Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chd8Q09XV5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
Chd8Q09XV5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chd8Q09XV5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.33□□□□□ -0.28
Chd8Q09XV5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.33□□□□□ -0.28
Chd8Q09XV5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Gm6257-201ENSMUST00000163864 910 ntBASIC13.33□□□□□ -0.28
Chd8Q09XV5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.33□□□□□ -0.28
Chd8Q09XV5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chd8Q09XV5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chd8Q09XV5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.32□□□□□ -0.28
Chd8Q09XV5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Gm6082-201ENSMUST00000215204 454 ntBASIC13.32□□□□□ -0.28
Chd8Q09XV5 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.32□□□□□ -0.28
Chd8Q09XV5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chd8Q09XV5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gm12928-201ENSMUST00000117115 573 ntBASIC13.31□□□□□ -0.28
Chd8Q09XV5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gm27438-201ENSMUST00000183480 110 ntBASIC13.31□□□□□ -0.28
Chd8Q09XV5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.31□□□□□ -0.28
Chd8Q09XV5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms