Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm9385-201ENSMUST00000117563 472 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm25349-201ENSMUST00000177728 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm23616-201ENSMUST00000177797 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm25871-201ENSMUST00000177816 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24752-201ENSMUST00000178240 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24496-201ENSMUST00000178287 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm25649-201ENSMUST00000178476 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm25548-201ENSMUST00000178681 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm23147-201ENSMUST00000178841 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm26095-201ENSMUST00000179270 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm22171-201ENSMUST00000179283 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm23936-201ENSMUST00000179354 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm22619-201ENSMUST00000179516 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm25255-201ENSMUST00000179579 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24755-201ENSMUST00000179691 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm26506-201ENSMUST00000179692 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm25086-201ENSMUST00000179931 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm23243-201ENSMUST00000180047 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24659-201ENSMUST00000180212 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm24169-201ENSMUST00000180244 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm23689-201ENSMUST00000180354 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm27359-201ENSMUST00000184153 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm27785-201ENSMUST00000184268 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm27466-201ENSMUST00000184396 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm27430-201ENSMUST00000184585 107 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm27703-201ENSMUST00000184836 110 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm44333-201ENSMUST00000197168 107 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm18057-201ENSMUST00000208220 503 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.24■□□□□ 0.03
Ebf1Q07802 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ebf1Q07802 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ebf1Q07802 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ebf1Q07802 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.23■□□□□ 0.03
Ebf1Q07802 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ebf1Q07802 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.23■□□□□ 0.03
Ebf1Q07802 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.23■□□□□ 0.03
Ebf1Q07802 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ebf1Q07802 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ebf1Q07802 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.23■□□□□ 0.03
Ebf1Q07802 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ebf1Q07802 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ebf1Q07802 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.23■□□□□ 0.03
Ebf1Q07802 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ebf1Q07802 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ebf1Q07802 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.22■□□□□ 0.03
Ebf1Q07802 Gm10253-201ENSMUST00000194270 940 ntBASIC15.22■□□□□ 0.03
Ebf1Q07802 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.22■□□□□ 0.03
Ebf1Q07802 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ebf1Q07802 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ebf1Q07802 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms