Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.93□□□□□ -0.66
Hspg2Q05793 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hspg2Q05793 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Hspg2Q05793 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.93□□□□□ -0.66
Hspg2Q05793 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC10.93□□□□□ -0.66
Hspg2Q05793 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.93□□□□□ -0.66
Hspg2Q05793 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hspg2Q05793 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.93□□□□□ -0.66
Hspg2Q05793 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.93□□□□□ -0.66
Hspg2Q05793 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.92□□□□□ -0.66
Hspg2Q05793 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Gm11543-201ENSMUST00000120758 370 ntBASIC10.92□□□□□ -0.66
Hspg2Q05793 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.92□□□□□ -0.66
Hspg2Q05793 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hspg2Q05793 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Gm12742-201ENSMUST00000117326 410 ntBASIC10.92□□□□□ -0.66
Hspg2Q05793 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.92□□□□□ -0.66
Hspg2Q05793 Gm12091-201ENSMUST00000146791 830 ntBASIC10.92□□□□□ -0.66
Hspg2Q05793 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hspg2Q05793 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Dupd1-202ENSMUST00000224735 548 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.91□□□□□ -0.66
Hspg2Q05793 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm9522-201ENSMUST00000182394 926 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm2495-201ENSMUST00000191160 466 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm45244-201ENSMUST00000211328 2200 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm17420-201ENSMUST00000164753 153 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms