Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a2Q02788 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a2Q02788 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Col6a2Q02788 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a2Q02788 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col6a2Q02788 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.01□□□□□ -0.01
Col6a2Q02788 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a2Q02788 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a2Q02788 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col6a2Q02788 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a2Q02788 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a2Q02788 Gm8242-201ENSMUST00000193029 1420 ntBASIC15□□□□□ -0.01
Col6a2Q02788 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col6a2Q02788 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Gm13365-201ENSMUST00000121188 973 ntBASIC15□□□□□ -0.01
Col6a2Q02788 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Gm45612-201ENSMUST00000211320 160 ntBASIC15□□□□□ -0.01
Col6a2Q02788 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15□□□□□ -0.01
Col6a2Q02788 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Gm27528-202ENSMUST00000222916 2012 ntBASIC15□□□□□ -0.01
Col6a2Q02788 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col6a2Q02788 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a2Q02788 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.99□□□□□ -0.01
Col6a2Q02788 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a2Q02788 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a2Q02788 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col6a2Q02788 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col6a2Q02788 Gm14701-201ENSMUST00000117156 348 ntBASIC14.99□□□□□ -0.01
Col6a2Q02788 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.99□□□□□ -0.01
Col6a2Q02788 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.99□□□□□ -0.01
Col6a2Q02788 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a2Q02788 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.98□□□□□ -0.01
Col6a2Q02788 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.98□□□□□ -0.01
Col6a2Q02788 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms