Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a1Q00780 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a1Q00780 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.82□□□□□ -0.36
Col8a1Q00780 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a1Q00780 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a1Q00780 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.82□□□□□ -0.36
Col8a1Q00780 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a1Q00780 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col8a1Q00780 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col8a1Q00780 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col8a1Q00780 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.81□□□□□ -0.36
Col8a1Q00780 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.81□□□□□ -0.36
Col8a1Q00780 Gm6745-201ENSMUST00000199216 526 ntBASIC12.81□□□□□ -0.36
Col8a1Q00780 Gm6218-201ENSMUST00000219812 628 ntBASIC12.81□□□□□ -0.36
Col8a1Q00780 Gm9063-201ENSMUST00000223299 582 ntBASIC12.81□□□□□ -0.36
Col8a1Q00780 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.81□□□□□ -0.36
Col8a1Q00780 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.81□□□□□ -0.36
Col8a1Q00780 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.81□□□□□ -0.36
Col8a1Q00780 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
Col8a1Q00780 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.81□□□□□ -0.36
Col8a1Q00780 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col8a1Q00780 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col8a1Q00780 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col8a1Q00780 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Col8a1Q00780 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm15653-201ENSMUST00000119247 907 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Col8a1Q00780 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm23984-201ENSMUST00000157139 203 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Mir7085-201ENSMUST00000184353 66 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm38225-201ENSMUST00000194001 393 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm2272-201ENSMUST00000194903 582 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.8□□□□□ -0.36
Col8a1Q00780 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Col8a1Q00780 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.8□□□□□ -0.36
Col8a1Q00780 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col8a1Q00780 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm12859-201ENSMUST00000117834 427 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm2810-201ENSMUST00000118681 990 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm12138-201ENSMUST00000122180 951 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms