Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Smn1P97801 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Gm9172-201ENSMUST00000212092 954 ntBASIC12.92□□□□□ -0.34
Smn1P97801 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.92□□□□□ -0.34
Smn1P97801 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Smn1P97801 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smn1P97801 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smn1P97801 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smn1P97801 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smn1P97801 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.91□□□□□ -0.34
Smn1P97801 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.91□□□□□ -0.34
Smn1P97801 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Smn1P97801 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.91□□□□□ -0.34
Smn1P97801 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.91□□□□□ -0.34
Smn1P97801 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smn1P97801 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Smn1P97801 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smn1P97801 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smn1P97801 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smn1P97801 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smn1P97801 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smn1P97801 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.9□□□□□ -0.34
Smn1P97801 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.9□□□□□ -0.34
Smn1P97801 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.9□□□□□ -0.34
Smn1P97801 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smn1P97801 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.9□□□□□ -0.34
Smn1P97801 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smn1P97801 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms