Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.65□□□□□ -0.38
Npas1P97459 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npas1P97459 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Npas1P97459 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Npas1P97459 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.64□□□□□ -0.39
Npas1P97459 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.64□□□□□ -0.39
Npas1P97459 Gm10052-201ENSMUST00000168019 960 ntBASIC12.64□□□□□ -0.39
Npas1P97459 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.64□□□□□ -0.39
Npas1P97459 Gm7729-201ENSMUST00000050143 801 ntBASIC12.64□□□□□ -0.39
Npas1P97459 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npas1P97459 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Npas1P97459 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Npas1P97459 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.63□□□□□ -0.39
Npas1P97459 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.63□□□□□ -0.39
Npas1P97459 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.63□□□□□ -0.39
Npas1P97459 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.63□□□□□ -0.39
Npas1P97459 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Npas1P97459 Gm44430-201ENSMUST00000203376 995 ntBASIC12.63□□□□□ -0.39
Npas1P97459 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Npas1P97459 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Npas1P97459 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npas1P97459 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.62□□□□□ -0.39
Npas1P97459 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.62□□□□□ -0.39
Npas1P97459 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Npas1P97459 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.62□□□□□ -0.39
Npas1P97459 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms