Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.81■□□□□ 0.6
Nkx2-3P97334 Gm8749-201ENSMUST00000117737 331 ntBASIC18.81■□□□□ 0.6
Nkx2-3P97334 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Gm27838-201ENSMUST00000184829 128 ntBASIC18.81■□□□□ 0.6
Nkx2-3P97334 Gm16476-201ENSMUST00000221544 139 ntBASIC18.81■□□□□ 0.6
Nkx2-3P97334 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.81■□□□□ 0.6
Nkx2-3P97334 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nkx2-3P97334 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Gm27631-201ENSMUST00000184163 466 ntBASIC18.8■□□□□ 0.6
Nkx2-3P97334 Gm37230-201ENSMUST00000194491 818 ntBASIC18.8■□□□□ 0.6
Nkx2-3P97334 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.8■□□□□ 0.6
Nkx2-3P97334 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-3P97334 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.79■□□□□ 0.6
Nkx2-3P97334 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Gm45098-201ENSMUST00000207179 657 ntBASIC18.79■□□□□ 0.6
Nkx2-3P97334 Dupd1-202ENSMUST00000224735 548 ntBASIC18.79■□□□□ 0.6
Nkx2-3P97334 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-3P97334 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.78■□□□□ 0.6
Nkx2-3P97334 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Gm4875-201ENSMUST00000118257 786 ntBASIC18.78■□□□□ 0.6
Nkx2-3P97334 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nkx2-3P97334 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nkx2-3P97334 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms