Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim43cP86449 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim43cP86449 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Trim43cP86449 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim43cP86449 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Trim43cP86449 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim43cP86449 AW822252-206ENSMUST00000208904 237 ntBASIC16.35■□□□□ 0.21
Trim43cP86449 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim43cP86449 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trim43cP86449 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trim43cP86449 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.35■□□□□ 0.21
Trim43cP86449 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim43cP86449 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim43cP86449 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim43cP86449 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim43cP86449 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Gm2272-201ENSMUST00000194903 582 ntBASIC16.34■□□□□ 0.21
Trim43cP86449 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim43cP86449 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim43cP86449 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trim43cP86449 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim43cP86449 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43cP86449 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim43cP86449 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43cP86449 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43cP86449 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43cP86449 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43cP86449 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim43cP86449 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Trim43cP86449 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43cP86449 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim43cP86449 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43cP86449 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43cP86449 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43cP86449 Gm16198-201ENSMUST00000118766 670 ntBASIC16.33■□□□□ 0.2
Trim43cP86449 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim43cP86449 Gm5177-201ENSMUST00000183092 997 ntBASIC16.33■□□□□ 0.2
Trim43cP86449 Gm27525-201ENSMUST00000184465 107 ntBASIC16.33■□□□□ 0.2
Trim43cP86449 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim43cP86449 Gm5364-201ENSMUST00000216789 889 ntBASIC16.33■□□□□ 0.2
Trim43cP86449 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim43cP86449 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43cP86449 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43cP86449 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43cP86449 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim43cP86449 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.32■□□□□ 0.2
Trim43cP86449 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Gm9727-201ENSMUST00000161387 555 ntBASIC16.32■□□□□ 0.2
Trim43cP86449 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Gm45747-201ENSMUST00000212203 999 ntBASIC16.32■□□□□ 0.2
Trim43cP86449 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43cP86449 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim43cP86449 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43cP86449 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trim43cP86449 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43cP86449 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43cP86449 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim43cP86449 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.31■□□□□ 0.2
Trim43cP86449 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms