Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm45167-201ENSMUST00000208007 322 ntBASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim4P70271 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim4P70271 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.53□□□□□ -0.4
Pdlim4P70271 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim4P70271 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim4P70271 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim4P70271 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim4P70271 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim4P70271 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim4P70271 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.52□□□□□ -0.4
Pdlim4P70271 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim4P70271 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim4P70271 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.52□□□□□ -0.41
Pdlim4P70271 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.52□□□□□ -0.41
Pdlim4P70271 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdlim4P70271 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim4P70271 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.51□□□□□ -0.41
Pdlim4P70271 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.51□□□□□ -0.41
Pdlim4P70271 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim4P70271 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms