Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.26■□□□□ 0.03
ThraP63058 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.25■□□□□ 0.03
ThraP63058 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.25■□□□□ 0.03
ThraP63058 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.25■□□□□ 0.03
ThraP63058 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.25■□□□□ 0.03
ThraP63058 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.25■□□□□ 0.03
ThraP63058 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.25■□□□□ 0.03
ThraP63058 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.25■□□□□ 0.03
ThraP63058 Gm43575-201ENSMUST00000196420 516 ntBASIC15.25■□□□□ 0.03
ThraP63058 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.25■□□□□ 0.03
ThraP63058 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ThraP63058 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ThraP63058 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ThraP63058 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Gm24513-201ENSMUST00000174964 138 ntBASIC15.24■□□□□ 0.03
ThraP63058 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.24■□□□□ 0.03
ThraP63058 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ThraP63058 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ThraP63058 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ThraP63058 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.23■□□□□ 0.03
ThraP63058 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ThraP63058 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.23■□□□□ 0.03
ThraP63058 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ThraP63058 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.23■□□□□ 0.03
ThraP63058 Gm5682-201ENSMUST00000173402 505 ntBASIC15.23■□□□□ 0.03
ThraP63058 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ThraP63058 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ThraP63058 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ThraP63058 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ThraP63058 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.22■□□□□ 0.03
ThraP63058 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
ThraP63058 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms