Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabra1P62812 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabra1P62812 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gabra1P62812 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Gabra1P62812 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabra1P62812 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabra1P62812 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabra1P62812 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.68□□□□□ -0.38
Gabra1P62812 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.68□□□□□ -0.38
Gabra1P62812 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.68□□□□□ -0.38
Gabra1P62812 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gabra1P62812 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gabra1P62812 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Gabra1P62812 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.68□□□□□ -0.38
Gabra1P62812 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabra1P62812 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gabra1P62812 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabra1P62812 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.67□□□□□ -0.38
Gabra1P62812 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gabra1P62812 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabra1P62812 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.66□□□□□ -0.38
Gabra1P62812 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.66□□□□□ -0.38
Gabra1P62812 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.66□□□□□ -0.38
Gabra1P62812 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms