Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm6P62313 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm6P62313 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.21□□□□□ -0.3
Lsm6P62313 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm6P62313 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lsm6P62313 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Lsm6P62313 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.2□□□□□ -0.3
Lsm6P62313 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Lsm6P62313 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.2□□□□□ -0.3
Lsm6P62313 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.2□□□□□ -0.3
Lsm6P62313 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.2□□□□□ -0.3
Lsm6P62313 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm6P62313 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.19□□□□□ -0.3
Lsm6P62313 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lsm6P62313 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Gm13036-201ENSMUST00000117799 748 ntBASIC13.19□□□□□ -0.3
Lsm6P62313 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.19□□□□□ -0.3
Lsm6P62313 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.19□□□□□ -0.3
Lsm6P62313 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.19□□□□□ -0.3
Lsm6P62313 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.19□□□□□ -0.3
Lsm6P62313 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Lsm6P62313 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.19□□□□□ -0.3
Lsm6P62313 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lsm6P62313 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm6P62313 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.18□□□□□ -0.3
Lsm6P62313 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Lsm6P62313 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.18□□□□□ -0.3
Lsm6P62313 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm6P62313 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lsm6P62313 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Lsm6P62313 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.17□□□□□ -0.3
Lsm6P62313 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.17□□□□□ -0.3
Lsm6P62313 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm6P62313 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm6P62313 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms