Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lsm3P62311 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lsm3P62311 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm3P62311 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.76□□□□□ -0.21
Lsm3P62311 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Lsm3P62311 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.76□□□□□ -0.21
Lsm3P62311 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.76□□□□□ -0.21
Lsm3P62311 Timm23-208ENSMUST00000226683 750 ntBASIC13.76□□□□□ -0.21
Lsm3P62311 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lsm3P62311 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lsm3P62311 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Lsm3P62311 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm3P62311 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Lsm3P62311 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Lsm3P62311 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.75□□□□□ -0.21
Lsm3P62311 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.75□□□□□ -0.21
Lsm3P62311 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lsm3P62311 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Lsm3P62311 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.75□□□□□ -0.21
Lsm3P62311 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Gm10566-201ENSMUST00000086739 996 ntBASIC13.75□□□□□ -0.21
Lsm3P62311 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lsm3P62311 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm3P62311 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Lsm3P62311 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.74□□□□□ -0.21
Lsm3P62311 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm3P62311 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.74□□□□□ -0.21
Lsm3P62311 Gm18284-201ENSMUST00000172604 624 ntBASIC13.74□□□□□ -0.21
Lsm3P62311 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.74□□□□□ -0.21
Lsm3P62311 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lsm3P62311 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Lsm3P62311 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lsm3P62311 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms