Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ythdf1P59326 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ythdf1P59326 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ythdf1P59326 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ythdf1P59326 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ythdf1P59326 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Gm2274-201ENSMUST00000184539 609 ntBASIC14.48□□□□□ -0.09
Ythdf1P59326 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Ythdf1P59326 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ythdf1P59326 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.47□□□□□ -0.09
Ythdf1P59326 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.47□□□□□ -0.09
Ythdf1P59326 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Gm12527-201ENSMUST00000117967 564 ntBASIC14.47□□□□□ -0.09
Ythdf1P59326 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.47□□□□□ -0.09
Ythdf1P59326 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ythdf1P59326 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ythdf1P59326 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.46□□□□□ -0.09
Ythdf1P59326 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ythdf1P59326 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Ythdf1P59326 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ythdf1P59326 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.46□□□□□ -0.09
Ythdf1P59326 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Gm8495-201ENSMUST00000188740 694 ntBASIC14.46□□□□□ -0.09
Ythdf1P59326 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.46□□□□□ -0.09
Ythdf1P59326 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.46□□□□□ -0.09
Ythdf1P59326 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.46□□□□□ -0.09
Ythdf1P59326 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ythdf1P59326 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ythdf1P59326 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ythdf1P59326 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ythdf1P59326 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.46□□□□□ -0.1
Ythdf1P59326 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ythdf1P59326 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ythdf1P59326 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ythdf1P59326 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ythdf1P59326 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ythdf1P59326 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms