Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Nub1P54729 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Nub1P54729 Gm13597-201ENSMUST00000121239 375 ntBASIC16.18■□□□□ 0.18
Nub1P54729 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nub1P54729 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Nub1P54729 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Nub1P54729 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.18■□□□□ 0.18
Nub1P54729 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nub1P54729 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nub1P54729 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Nub1P54729 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.17■□□□□ 0.18
Nub1P54729 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nub1P54729 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.17■□□□□ 0.18
Nub1P54729 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Gm18206-201ENSMUST00000207027 926 ntBASIC16.17■□□□□ 0.18
Nub1P54729 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.17■□□□□ 0.18
Nub1P54729 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nub1P54729 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.17■□□□□ 0.18
Nub1P54729 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nub1P54729 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Nub1P54729 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nub1P54729 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Nub1P54729 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.16■□□□□ 0.18
Nub1P54729 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.16■□□□□ 0.18
Nub1P54729 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.16■□□□□ 0.18
Nub1P54729 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Celf4-206ENSMUST00000224553 1729 ntBASIC16.16■□□□□ 0.18
Nub1P54729 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nub1P54729 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.16■□□□□ 0.18
Nub1P54729 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.16■□□□□ 0.18
Nub1P54729 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nub1P54729 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
Nub1P54729 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nub1P54729 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms